- Predicted Gene MLOC_54493
MLOC_54493 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.8044 | 8.03847 | 7.79923 | 9.51101 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.67606 | 1.92224 | 2.33766 | 2.68328 |
| INF1 | Young developing inflorescences (5mm) | 17.711 | 15.6623 | 15.9613 | 15.7395 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.8575 | 16.3789 | 17.11 | 19.3712 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.07754 | 7.61778 | 9.32816 | 9.67558 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.40535 | 4.34429 | 7.18887 | 14.7936 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.63554 | 8.64996 | 7.7909 | 9.12527 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.10919 | 1.14826 | 0.964489 | 2.9894 |
CDS Structure of MLOC_54493
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54493.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g01690.1 |
-2 |
9e-135 |
395 |
256/271 (94%) |
13106.m00080 protein septum site-determining protein minD, putative, expressed |
| TAIR PP10 |
AT5G24020.1 |
-2 |
1e-98 |
302 |
197/266 (74%) |
| Symbols: MIND, ARC11, ATMIND1 | septum site-determining protein (MIND) | chr5:8116731-8117711 FORWARD LENGTH=326 |