MLOC_54492 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8794090.7732160.8232990.85521
LEAShoots from the seedlings (10 cm shoot stage)1.405450.9921790.6123910.832276
INF1Young developing inflorescences (5mm)0.8280260.9965391.061650.84949
INF2Developing inflorescences (1-1.5 cm)2.825462.249712.597312.85486
ROORoots from the seedlings (10 cm shoot stage)2.423972.063781.676822.44921
NODDeveloping tillers at six leaf stage, 3rd internode0.4444650.9419171.211422.78064
CAR5Developing grain, bracts removed (5 DPA)1.40761.864661.595221.6634
CAR15Developing grain, bracts removed (15 DPA)1.794521.654651.615764.189



CDS Structure of MLOC_54492






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54492.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54492.2CUST_13223_PI427708080AvailableAvailablecontig_39172 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g35050.1 -1 3e-54 193 146/388 (38%) 13107.m03580 protein OsFBX237 - F-box domain containing protein, expressed
TAIR PP10None-----