MLOC_5449 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 83.2137 | 64.9292 | 65.809 | 69.66 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 51.4186 | 16.4253 | 22.0067 | 23.9234 |
| INF1 | Young developing inflorescences (5mm) | 1.97783 | 2.17041 | 3.95901 | 2.37057 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.2854 | 8.24515 | 15.2247 | 11.9331 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 44.2554 | 49.4801 | 39.1582 | 51.5838 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 33.677 | 41.8872 | 20.6451 | 86.5305 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.27375 | 3.98441 | 4.02185 | 4.11404 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.90004 | 2.26715 | 1.50452 | 4.87103 |
CDS Structure of MLOC_5449
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5449.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g42520.1 |
-3 |
0.0 |
623 |
301/350 (86%) |
13101.m04369 protein expressed protein |
| TAIR PP10 |
AT5G11420.1 |
-3 |
6e-162 |
481 |
234/343 (68%) |
Protein of unknown function, DUF642 | chr5:3644655-3646991 FORWARD LENGTH=366 |
