- Predicted Gene MLOC_54487
MLOC_54487 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54487_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54487_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 14.9019 | 10.7038 | 10.0431 | 13.2456 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.90249 | 3.99805 | 5.58216 | 4.4978 |
INF1 | Young developing inflorescences (5mm) | 15.8088 | 17.8728 | 21.8792 | 17.4865 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.6984 | 18.5018 | 18.204 | 21.9725 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.4382 | 11.8216 | 13.8738 | 15.1972 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.34901 | 14.5782 | 16.0255 | 45.9997 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.84143 | 8.98421 | 7.17666 | 9.01228 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.64364 | 1.23305 | 1.32672 | 3.71781 |
CDS Structure of MLOC_54487
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54487.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g44630.2 |
-1 |
3e-119 |
358 |
194/229 (85%) |
13107.m04698 protein thymidylate kinase, putative, expressed |
TAIR PP10 |
AT5G59440.2 |
-1 |
4e-86 |
270 |
143/202 (71%) |
| Symbols: ZEU1, ATTMPK.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:23971889-23972729 FORWARD LENGTH=224 |