MLOC_54485 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains123.182112.218103.399113.531
LEAShoots from the seedlings (10 cm shoot stage)87.3571125.011142.71499.665
INF1Young developing inflorescences (5mm)149.287143.872140.177123.165
INF2Developing inflorescences (1-1.5 cm)182.432139.31158.153175.238
ROORoots from the seedlings (10 cm shoot stage)172.879164.994173.394196.875
NODDeveloping tillers at six leaf stage, 3rd internode64.357566.7178126.931249.641
CAR5Developing grain, bracts removed (5 DPA)113.864125.875122.753120.058
CAR15Developing grain, bracts removed (15 DPA)34.529437.88631.948780.5765



CDS Structure of MLOC_54485






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250868.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250868.1CUST_18920_PI427708080NoneNoneNone
MLOC_54485.1NoneAvailableAvailablecontig_39167 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----