MLOC_54442 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.774524.002674.264194.35956
LEAShoots from the seedlings (10 cm shoot stage)3.709782.847364.170063.19241
INF1Young developing inflorescences (5mm)8.368749.089468.234087.46078
INF2Developing inflorescences (1-1.5 cm)10.262510.45569.1953711.2514
ROORoots from the seedlings (10 cm shoot stage)5.749884.842354.826956.26369
NODDeveloping tillers at six leaf stage, 3rd internode1.782433.748175.259813.1337
CAR5Developing grain, bracts removed (5 DPA)7.428728.340817.036897.70925
CAR15Developing grain, bracts removed (15 DPA)4.898444.427584.078410.6881



CDS Structure of MLOC_54442






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK358153
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358153CUST_19925_PI427708080NoneNoneNone
MLOC_27438.1NoneAvailableNonecontig_183197 (Not mapped)
MLOC_54442.2NoneAvailableAvailablecontig_39140 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----