MLOC_54441 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.659.662629.0362510.6362
LEAShoots from the seedlings (10 cm shoot stage)5.386450.6530551.581382.04606
INF1Young developing inflorescences (5mm)0.267770.02870090.2114920.149643
INF2Developing inflorescences (1-1.5 cm)0.2387450.2801370.3116720.335932
ROORoots from the seedlings (10 cm shoot stage)4.33484.572084.270335.15929
NODDeveloping tillers at six leaf stage, 3rd internode0.4848592.966470.01667396.11166
CAR5Developing grain, bracts removed (5 DPA)3.140862.429331.85032.63777
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_54441






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366997
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366997CUST_25075_PI427708080NoneNoneNone
MLOC_5164.1NoneAvailableNonecontig_135947 (Mapped)
MLOC_54441.1NoneAvailableAvailablecontig_39139 (Mapped)
MLOC_9619.1NoneAvailableNonecontig_153959 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----