MLOC_5444 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.4950418.107716.185816.5896
LEAShoots from the seedlings (10 cm shoot stage)22.426619.04422.40520.0087
INF1Young developing inflorescences (5mm)32.32833.359732.141328.7159
INF2Developing inflorescences (1-1.5 cm)53.887543.432542.354952.161
ROORoots from the seedlings (10 cm shoot stage)13.152520.887913.848226.3014
NODDeveloping tillers at six leaf stage, 3rd internode14.389922.081515.376677.8585
CAR5Developing grain, bracts removed (5 DPA)34.283429.941532.698632.0188
CAR15Developing grain, bracts removed (15 DPA)67.974360.222867.4165151.041



CDS Structure of MLOC_5444






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_5444.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_5444.3CUST_13212_PI427708080AvailableAvailablecontig_136280 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g37860.1 +2 0.0 1565 954/1538 (62%) 13112.m03898 protein expressed protein
TAIR PP10 AT4G24680.1 +2 2e-92 331 414/1555 (27%) | Symbols: MOS1 | modifier of snc1 | chr4:12733425-12739737 FORWARD LENGTH=1427