- Predicted Gene MLOC_54420
MLOC_54420 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54420_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54420_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.294357 | 0.116857 | 0.185154 | 0.182938 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.28985 | 0.296331 | 0.201814 | 0.226973 |
INF1 | Young developing inflorescences (5mm) | 0.0180346 | 0 | 0 | 0.0163722 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.51627 | 3.38588 | 2.22123 | 4.32032 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0115069 | 0.00646411 | 0.0507892 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.435144 | 0.612436 | 0.347732 | 0.51002 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0172731 | 0 | 0.0248332 | 0.047472 |
CDS Structure of MLOC_54420
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54420.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g25980.1 |
+2 |
0.0 |
712 |
361/475 (76%) |
13104.m02454 protein cytokinin-O-glucosyltransferase 2, putative, expressed |
TAIR PP10 |
AT1G22380.1 |
+2 |
8e-178 |
518 |
266/481 (55%) |
| Symbols: AtUGT85A3, UGT85A3 | UDP-glucosyl transferase 85A3 | chr1:7900522-7902332 REVERSE LENGTH=488 |