- Predicted Gene MLOC_54419
MLOC_54419 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 369.637 | 319.618 | 332.481 | 312.506 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 144.205 | 123.802 | 142.214 | 100.981 |
| INF1 | Young developing inflorescences (5mm) | 55.3397 | 54.6657 | 45.4544 | 44.4423 |
| INF2 | Developing inflorescences (1-1.5 cm) | 55.6488 | 62.2433 | 74.6772 | 67.3327 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 416.769 | 254.972 | 308.48 | 272.301 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 259.038 | 230.263 | 215.172 | 501.02 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 157.49 | 160.422 | 120.364 | 137.437 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 57.0776 | 41.3916 | 47.0416 | 118.699 |
CDS Structure of MLOC_54419
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54419.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g26690.1 |
-3 |
0.0 |
531 |
264/291 (91%) |
13107.m02646 protein aquaporin protein, putative, expressed |
| TAIR PP10 |
AT3G54820.1 |
-3 |
7e-165 |
472 |
232/279 (83%) |
| Symbols: PIP2D, PIP2;5 | plasma membrane intrinsic protein 2;5 | chr3:20302117-20303738 FORWARD LENGTH=286 |