- Predicted Gene MLOC_54414
MLOC_54414 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 19.9016 | 14.6494 | 12.5537 | 18.7967 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.7266 | 10.9023 | 16.8433 | 12.8839 |
| INF1 | Young developing inflorescences (5mm) | 53.4093 | 64.6546 | 65.442 | 62.3187 |
| INF2 | Developing inflorescences (1-1.5 cm) | 90.0019 | 67.972 | 72.2535 | 97.7681 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 27.667 | 21.5852 | 22.1621 | 32.3166 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.44367 | 3.46138 | 15.5761 | 18.4336 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 25.531 | 25.0655 | 23.6782 | 29.4712 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.00884 | 9.02006 | 7.51862 | 25.2484 |
CDS Structure of MLOC_54414
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54414.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g08360.1 |
+2 |
2e-156 |
450 |
222/238 (93%) |
13105.m00919 protein rRNA 2-O-methyltransferase fibrillarin 2, putative, expressed |
| TAIR PP10 |
AT5G52470.1 |
+2 |
1e-144 |
419 |
206/236 (87%) |
| Symbols: FIB1, FBR1, ATFIB1, ATFBR1, SKIP7 | fibrillarin 1 | chr5:21294290-21296509 FORWARD LENGTH=308 |