MLOC_54411 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.237141.294640.2803090
LEAShoots from the seedlings (10 cm shoot stage)1.6144500.3879970
INF1Young developing inflorescences (5mm)1.983795.760195.933980
INF2Developing inflorescences (1-1.5 cm)11.76316.368994.168650
ROORoots from the seedlings (10 cm shoot stage)0.4711171.026342.024880
NODDeveloping tillers at six leaf stage, 3rd internode1.38951.162763.709540
CAR5Developing grain, bracts removed (5 DPA)5.015753.498652.877530
CAR15Developing grain, bracts removed (15 DPA)1.044570.5521710.866730



CDS Structure of MLOC_54411






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK358867
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358867CUST_20024_PI427708080NoneNoneNone
MLOC_51877.1NoneAvailableNonecontig_371282 (Not mapped)
MLOC_54411.1NoneAvailableNonecontig_39116 (Mapped)
MLOC_80998.1NoneAvailableAvailablecontig_93981 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----