MLOC_54387 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains186.797129.507167.977160.015
LEAShoots from the seedlings (10 cm shoot stage)98.106454.1092144.82690.4207
INF1Young developing inflorescences (5mm)139.388119.247121.775113.608
INF2Developing inflorescences (1-1.5 cm)54.784874.486365.506778.7925
ROORoots from the seedlings (10 cm shoot stage)191.328107.542111.998155.292
NODDeveloping tillers at six leaf stage, 3rd internode106.02783.888428.1293247.699
CAR5Developing grain, bracts removed (5 DPA)295.228265.014301.47306.624
CAR15Developing grain, bracts removed (15 DPA)20.061516.682423.433446.7375



CDS Structure of MLOC_54387






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374484
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374484CUST_25878_PI427708080NoneNoneNone
MLOC_54387.1NoneAvailableAvailablecontig_391001 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----