- Predicted Gene MLOC_54382
MLOC_54382 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 405.171 | 419.995 | 416.77 | 447.433 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 476.771 | 219.08 | 194.146 | 265.71 |
| INF1 | Young developing inflorescences (5mm) | 416.41 | 370.244 | 386.89 | 352.691 |
| INF2 | Developing inflorescences (1-1.5 cm) | 459.075 | 392.059 | 460.413 | 493.841 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 464.466 | 424.041 | 416.774 | 560.484 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 491.729 | 540.592 | 440.457 | 1823.68 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 442.839 | 405.283 | 394.724 | 428.122 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 81.1137 | 74.7386 | 75.0014 | 186.411 |
CDS Structure of MLOC_54382
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54382.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g01600.2 |
+3 |
0.0 |
756 |
375/377 (99%) |
13105.m00101 protein actin, putative, expressed |
| TAIR PP10 |
AT5G09810.1 |
+3 |
0.0 |
743 |
367/377 (97%) |
| Symbols: ACT7 | actin 7 | chr5:3052809-3054220 FORWARD LENGTH=377 |