MLOC_5438 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.1271 | 16.3602 | 16.5685 | 15.6595 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.2371 | 3.16476 | 5.09043 | 5.63169 |
| INF1 | Young developing inflorescences (5mm) | 13.4991 | 12.9214 | 11.5118 | 11.5538 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.986 | 14.3725 | 15.5431 | 16.6289 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.7809 | 14.2124 | 12.2279 | 14.9806 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 12.4952 | 15.6756 | 10.5018 | 35.7829 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 48.5654 | 41.0878 | 41.7373 | 45.0782 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.28914 | 1.16987 | 1.24845 | 3.20354 |
CDS Structure of MLOC_5438
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5438.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g45030.1 |
+1 |
0.0 |
1862 |
1128/1372 (82%) |
13108.m04908 protein multidrug resistance protein, putative, expressed |
| TAIR PP10 |
AT2G36910.1 |
+1 |
0.0 |
1771 |
996/1257 (79%) |
| Symbols: ATPGP1, PGP1, ABCB1 | ATP binding cassette subfamily B1 | chr2:15502162-15507050 FORWARD LENGTH=1286 |
