MLOC_54357 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.7369510.65019.068810
LEAShoots from the seedlings (10 cm shoot stage)11.871214.25619.635240
INF1Young developing inflorescences (5mm)17.273318.838420.20350
INF2Developing inflorescences (1-1.5 cm)19.336220.976921.24140
ROORoots from the seedlings (10 cm shoot stage)4.043367.427611.13330
NODDeveloping tillers at six leaf stage, 3rd internode6.600614.219998.766650
CAR5Developing grain, bracts removed (5 DPA)10.65796.519879.419120
CAR15Developing grain, bracts removed (15 DPA)6.333932.628165.495920



CDS Structure of MLOC_54357






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK371664
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371664CUST_22177_PI427708080NoneNoneNone
MLOC_27053.1NoneAvailableNonecontig_1801356 (Not mapped)
MLOC_5130.1NoneAvailableNonecontig_13591 (Mapped)
MLOC_54357.1NoneAvailableNonecontig_390708 (Not mapped)
MLOC_8595.1NoneAvailableAvailablecontig_144564 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----