- Predicted Gene MLOC_54335
MLOC_54335 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54335_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54335_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.0604486 | 0 | 0 | 0.0660658 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.0309226 | 0.0302716 | 0.0579979 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0161565 | 0.0183628 | 0.0356976 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.015048 | 0.0425422 | 0 | 0.0483597 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.099281 | 0.0631967 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0278115 | 0.0726127 | 0.177894 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.30072 | 6.44853 | 5.67456 | 6.64379 |
CAR15 | Developing grain, bracts removed (15 DPA) | 13.3364 | 16.9155 | 20.3522 | 43.6341 |
CDS Structure of MLOC_54335
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54335.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g48570.1 |
+2 |
4e-153 |
464 |
271/551 (49%) |
13102.m05495 protein peptide transporter PTR2, putative, expressed |
TAIR PP10 |
AT1G32450.1 |
+2 |
5e-152 |
461 |
287/559 (51%) |
| Symbols: NRT1.5 | nitrate transporter 1.5 | chr1:11715337-11719807 REVERSE LENGTH=614 |