- Predicted Gene MLOC_54323
MLOC_54323 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54323_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54323_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 64.5813 | 44.1595 | 38.9182 | 53.0103 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 23.0413 | 18.1826 | 25.8634 | 19.667 |
INF1 | Young developing inflorescences (5mm) | 50.4111 | 47.614 | 42.9 | 45.6202 |
INF2 | Developing inflorescences (1-1.5 cm) | 35.9176 | 36.3292 | 39.196 | 45.6713 |
ROO | Roots from the seedlings (10 cm shoot stage) | 43.8032 | 35.1704 | 44.227 | 48.6924 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.84317 | 2.8155 | 6.85561 | 11.2943 |
CAR5 | Developing grain, bracts removed (5 DPA) | 59.74 | 70.4377 | 61.3381 | 72.7784 |
CAR15 | Developing grain, bracts removed (15 DPA) | 13.4683 | 12.822 | 9.79448 | 32.724 |
CDS Structure of MLOC_54323
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54323.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g04290.1 |
+2 |
1e-72 |
223 |
111/121 (92%) |
13106.m00382 protein S10/S20 domain containing ribosomal protein, putative, expressed |
TAIR PP10 |
AT5G62300.2 |
+2 |
2e-66 |
205 |
102/117 (87%) |
Ribosomal protein S10p/S20e family protein | chr5:25021388-25022235 REVERSE LENGTH=124 |