MLOC_5431 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 25.3802 | 22.4069 | 22.618 | 23.6262 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.43106 | 1.28193 | 1.76467 | 2.86264 |
| INF1 | Young developing inflorescences (5mm) | 23.728 | 21.1102 | 27.7526 | 21.5163 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.1855 | 24.8618 | 24.4282 | 25.7554 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.05474 | 5.31647 | 5.84664 | 5.65637 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.994831 | 1.10848 | 0.155759 | 2.62992 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 18.5402 | 17.1154 | 20.3915 | 18.8713 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.60985 | 0.6964 | 2.50242 | 3.66776 |
CDS Structure of MLOC_5431
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5431.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g55130.2 |
+1 |
0.0 |
769 |
380/442 (86%) |
13102.m06317 protein OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed |
| TAIR PP10 |
AT4G30610.1 |
+1 |
0.0 |
652 |
308/442 (70%) |
| Symbols: BRS1, SCPL24 | alpha/beta-Hydrolases superfamily protein | chr4:14944219-14948391 FORWARD LENGTH=465 |
