- Predicted Gene MLOC_54304
MLOC_54304 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54304_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54304_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 84.3312 | 80.9253 | 90.5811 | 82.702 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 89.6559 | 114.194 | 108.381 | 85.8249 |
INF1 | Young developing inflorescences (5mm) | 33.0106 | 36.9326 | 40.7003 | 30.1079 |
INF2 | Developing inflorescences (1-1.5 cm) | 41.9381 | 45.7334 | 54.816 | 49.6405 |
ROO | Roots from the seedlings (10 cm shoot stage) | 113.088 | 137.667 | 129.362 | 154.175 |
NOD | Developing tillers at six leaf stage, 3rd internode | 147.836 | 99.102 | 99.7251 | 320.109 |
CAR5 | Developing grain, bracts removed (5 DPA) | 57.985 | 59.3973 | 53.4431 | 55.1053 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.0307 | 10.3509 | 11.5855 | 24.8056 |
CDS Structure of MLOC_54304
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54304.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g44050.1 |
+1 |
2e-144 |
411 |
198/206 (96%) |
13105.m04647 protein ras-related protein, putative, expressed |
TAIR PP10 |
AT3G18820.1 |
+1 |
7e-131 |
376 |
184/205 (90%) |
| Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B | RAB GTPase homolog G3F | chr3:6484266-6486005 FORWARD LENGTH=206 |