MLOC_54295 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.640514.281515.634911.3901
LEAShoots from the seedlings (10 cm shoot stage)9.640496.928713.90426.92082
INF1Young developing inflorescences (5mm)17.378419.091821.125311.6455
INF2Developing inflorescences (1-1.5 cm)18.702321.001221.845716.8285
ROORoots from the seedlings (10 cm shoot stage)14.658418.306620.884315.3759
NODDeveloping tillers at six leaf stage, 3rd internode13.261317.384216.614444.067
CAR5Developing grain, bracts removed (5 DPA)13.677816.033417.796810.9495
CAR15Developing grain, bracts removed (15 DPA)6.427387.714717.3348211.3466



CDS Structure of MLOC_54295






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367237
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367237CUST_25106_PI427708080NoneNoneNone
MLOC_21870.1NoneAvailableNonecontig_1599663 (Not mapped)
MLOC_54295.1NoneAvailableAvailablecontig_39034 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----