MLOC_54290 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.349514.778310.38913.2081
LEAShoots from the seedlings (10 cm shoot stage)3.236472.604884.032562.49549
INF1Young developing inflorescences (5mm)19.912623.740721.15917.7683
INF2Developing inflorescences (1-1.5 cm)12.912914.920211.983614.6364
ROORoots from the seedlings (10 cm shoot stage)6.4316810.62457.8538310.0824
NODDeveloping tillers at six leaf stage, 3rd internode0.2470050.5180460.4970241.44632
CAR5Developing grain, bracts removed (5 DPA)12.007514.455412.539512.5165
CAR15Developing grain, bracts removed (15 DPA)2.349812.052421.53734.88505



CDS Structure of MLOC_54290






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373953
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373953CUST_25805_PI427708080NoneNoneNone
MLOC_11613.1NoneAvailableNonecontig_1561472 (Mapped)
MLOC_54290.1NoneAvailableAvailablecontig_39031 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----