- Predicted Gene MLOC_54284
MLOC_54284 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.7699 | 12.6469 | 13.4185 | 13.6376 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 12.9426 | 12.7756 | 12.9914 | 11.2125 |
| INF1 | Young developing inflorescences (5mm) | 20.1644 | 17.8934 | 18.6434 | 16.729 |
| INF2 | Developing inflorescences (1-1.5 cm) | 29.6866 | 26.8976 | 29.4661 | 32.7556 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 17.089 | 15.1185 | 13.3319 | 19.257 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.7556 | 18.8455 | 20.1609 | 62.1443 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 14.0431 | 14.0127 | 12.3641 | 14.1161 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.1577 | 8.59267 | 7.31224 | 21.1288 |
CDS Structure of MLOC_54284
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54284.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g36930.1 |
-3 |
0.0 |
654 |
325/362 (90%) |
13103.m04028 protein DEAD-box ATP-dependent RNA helicase, putative, expressed |
| TAIR PP10 |
AT3G19760.1 |
-3 |
0.0 |
613 |
299/363 (82%) |
| Symbols: EIF4A-III | eukaryotic initiation factor 4A-III | chr3:6863790-6866242 FORWARD LENGTH=408 |