- Predicted Gene MLOC_54282
MLOC_54282 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0.0986268 | 0 | 0.216801 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0514235 | 0 | 0 | 0.0464606 |
| INF1 | Young developing inflorescences (5mm) | 0.0250594 | 0 | 0.031957 | 0.0491666 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.056405 | 0 | 0 | 0.0707379 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0426507 | 0 | 0 | 0.00249584 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.92641 | 9.31535 | 8.59904 | 9.75918 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 113.717 | 102.478 | 113.032 | 283.938 |
CDS Structure of MLOC_54282
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54282.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g41160.1 |
+2 |
5e-81 |
258 |
165/338 (49%) |
13110.m03829 protein expressed protein |
| TAIR PP10 |
AT5G13620.1 |
+2 |
2e-13 |
71 |
32/89 (36%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4385385-4386373 REVERSE LENGTH=301 |