- Predicted Gene MLOC_54280
MLOC_54280 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.904 | 7.04062 | 7.75672 | 7.74368 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.32913 | 2.73723 | 3.98792 | 4.08005 |
| INF1 | Young developing inflorescences (5mm) | 11.1764 | 12.2743 | 11.474 | 9.81251 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.85221 | 10.4149 | 8.80631 | 10.2886 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.74717 | 6.2141 | 6.26273 | 7.29396 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.50874 | 2.72453 | 4.5209 | 10.1294 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.8223 | 8.68612 | 10.7374 | 9.51361 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.72774 | 1.05116 | 1.68181 | 3.44339 |
CDS Structure of MLOC_54280
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54280.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g41150.1 |
+1 |
0.0 |
761 |
396/439 (90%) |
13110.m03828 protein aminotransferase, classes I and II, domain containing protein, expressed |
| TAIR PP10 |
AT5G04620.2 |
+1 |
0.0 |
535 |
267/454 (59%) |
| Symbols: ATBIOF, BIOF | biotin F | chr5:1327292-1329934 FORWARD LENGTH=476 |