MLOC_54274 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.100998.6190510.70369.5872
LEAShoots from the seedlings (10 cm shoot stage)14.90220.209525.535617.7795
INF1Young developing inflorescences (5mm)8.8649910.238610.55218.89284
INF2Developing inflorescences (1-1.5 cm)8.636148.398038.8841810.1305
ROORoots from the seedlings (10 cm shoot stage)20.142817.896115.082523.027
NODDeveloping tillers at six leaf stage, 3rd internode11.276914.591623.08953.3356
CAR5Developing grain, bracts removed (5 DPA)14.314112.876212.288814.0418
CAR15Developing grain, bracts removed (15 DPA)10.12412.55218.0119227.1466



CDS Structure of MLOC_54274






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54274.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370543NoneNoneNoneNone
MLOC_54274.2CUST_3215_PI427708080AvailableAvailablecontig_39024 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g39670.1 -2 0.0 798 434/530 (82%) 13110.m03644 protein protein kinase family protein, putative, expressed
TAIR PP10 AT4G35230.1 -2 0.0 731 366/467 (78%) | Symbols: BSK1 | BR-signaling kinase 1 | chr4:16755325-16758041 REVERSE LENGTH=512