- Predicted Gene MLOC_54272
MLOC_54272 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 15.8996 | 13.88 | 14.5619 | 15.7884 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.91497 | 8.60505 | 12.358 | 7.69206 |
| INF1 | Young developing inflorescences (5mm) | 4.87406 | 7.02817 | 5.18047 | 5.61237 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.3583 | 3.55887 | 3.83056 | 4.3814 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 25.1557 | 9.55256 | 23.5759 | 15.8603 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.829367 | 1.14895 | 1.08715 | 3.29268 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.08051 | 0.110298 | 0.0281549 | 0.38963 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.063972 | 0.147401 | 0.0623987 | 0.282561 |
CDS Structure of MLOC_54272
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54272.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g53180.2 |
+1 |
0.0 |
540 |
270/328 (82%) |
13102.m06065 protein 1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed |
| TAIR PP10 |
AT1G05010.1 |
+1 |
4e-141 |
412 |
206/319 (65%) |
| Symbols: EFE, ACO4, EAT1 | ethylene-forming enzyme | chr1:1431419-1432695 REVERSE LENGTH=323 |