- Predicted Gene MLOC_54267
MLOC_54267 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 23.9207 | 24.8899 | 27.3182 | 27.3187 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 75.2278 | 11.1297 | 31.0076 | 31.4185 |
| INF1 | Young developing inflorescences (5mm) | 11.2615 | 7.54558 | 8.15627 | 8.35761 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.53734 | 1.50746 | 2.39485 | 2.16379 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.17602 | 10.1991 | 9.60385 | 11.6629 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 13.799 | 14.1451 | 3.67652 | 29.572 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 22.2376 | 24.7928 | 24.2644 | 26.7242 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.06053 | 0.771379 | 1.83059 | 3.12534 |
CDS Structure of MLOC_54267
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54267.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g21034.1 |
-3 |
0.0 |
689 |
353/427 (83%) |
13101.m02235 protein pectinesterase, putative, expressed |
| TAIR PP10 |
AT3G14310.1 |
-3 |
3e-169 |
504 |
283/543 (52%) |
| Symbols: ATPME3, PME3 | pectin methylesterase 3 | chr3:4772214-4775095 REVERSE LENGTH=592 |