MLOC_54262 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.42187601.01174
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)00.19444400.303908
CAR15Developing grain, bracts removed (15 DPA)1.749771.544591.046094.62867



CDS Structure of MLOC_54262






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54262.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54262.1NoneAvailableAvailablecontig_39006 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g34410.1 -1 3e-41 147 64/87 (74%) 13107.m03503 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10None-----