MLOC_54260 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains64.05552.383956.518957.1458
LEAShoots from the seedlings (10 cm shoot stage)37.239727.838546.203731.697
INF1Young developing inflorescences (5mm)36.344237.24334.723830.817
INF2Developing inflorescences (1-1.5 cm)22.085327.923825.392427.595
ROORoots from the seedlings (10 cm shoot stage)67.604653.201546.734165.7359
NODDeveloping tillers at six leaf stage, 3rd internode53.673548.451152.178149.929
CAR5Developing grain, bracts removed (5 DPA)41.017146.338146.673143.458
CAR15Developing grain, bracts removed (15 DPA)12.842113.309612.302630.4263



CDS Structure of MLOC_54260






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK368539
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368539CUST_21646_PI427708080NoneNoneNone
MLOC_54260.1NoneAvailableAvailablecontig_39006 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----