- Predicted Gene MLOC_54243
MLOC_54243 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.86846 | 6.91239 | 7.04043 | 7.1954 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.780027 | 2.25873 | 1.75563 | 1.33016 |
| INF1 | Young developing inflorescences (5mm) | 0.227882 | 0.400722 | 1.15941 | 0.543403 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0911765 | 0.073569 | 0.278363 | 0.150822 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 17.1978 | 13.8217 | 8.35509 | 15.658 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.11598 | 4.45028 | 0.346635 | 9.56626 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.168817 | 0.357282 | 0.144873 | 0.239955 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.212307 | 0.187417 | 0.0961303 | 0.445811 |
CDS Structure of MLOC_54243
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54243.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g29660.1 |
-2 |
0.0 |
1141 |
591/732 (81%) |
13109.m02941 protein white-brown complex homolog protein 11, putative, expressed |
| TAIR PP10 |
AT1G17840.1 |
-2 |
0.0 |
651 |
326/624 (52%) |
| Symbols: WBC11, ABCG11, DSO, COF1, ATWBC11 | white-brown complex homolog protein 11 | chr1:6142870-6145894 FORWARD LENGTH=703 |
