MLOC_54238 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.171561.428440.3848280
LEAShoots from the seedlings (10 cm shoot stage)1.828070.45543100
INF1Young developing inflorescences (5mm)2.541644.763494.10640
INF2Developing inflorescences (1-1.5 cm)6.205224.582156.416170
ROORoots from the seedlings (10 cm shoot stage)01.511700
NODDeveloping tillers at six leaf stage, 3rd internode0.691771.399340.7242310
CAR5Developing grain, bracts removed (5 DPA)0.9686972.5641.919040
CAR15Developing grain, bracts removed (15 DPA)0.5445540.8374360.8037510



CDS Structure of MLOC_54238






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK363145
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363145CUST_24613_PI427708080NoneNoneNone
MLOC_27319.1NoneAvailableAvailablecontig_182177 (Not mapped)
MLOC_35937.1NoneAvailableNonecontig_2526595 (Not mapped)
MLOC_47152.1NoneAvailableNonecontig_301569 (Not mapped)
MLOC_48846.1NoneAvailableNonecontig_330764 (Not mapped)
MLOC_54238.1NoneAvailableNonecontig_389865 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----