- Predicted Gene MLOC_54228
MLOC_54228 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0487884 | 0.0421699 | 0 | 0.0621012 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0786526 | 0 | 0 | 0.0823171 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0.0548466 | 0.0367867 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.038092 | 0 | 0 | 0.0461573 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.150802 | 0.0491768 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0799205 | 0 | 0.0275753 | 0.0315679 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 45.5155 | 53.8162 | 53.6218 | 49.2338 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 195.833 | 167.964 | 172.578 | 413.667 |
CDS Structure of MLOC_54228
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54228.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g32660.1 |
+2 |
3e-137 |
416 |
189/215 (88%) |
13102.m03538 protein 1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT5G03650.1 |
+2 |
3e-111 |
347 |
162/217 (75%) |
| Symbols: SBE2.2 | starch branching enzyme 2.2 | chr5:931924-937470 FORWARD LENGTH=805 |