MLOC_54215 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.15119.894421.82680
LEAShoots from the seedlings (10 cm shoot stage)23.128529.051823.64770
INF1Young developing inflorescences (5mm)23.302834.549129.6840
INF2Developing inflorescences (1-1.5 cm)32.678428.140425.41360
ROORoots from the seedlings (10 cm shoot stage)12.504317.225314.49040
NODDeveloping tillers at six leaf stage, 3rd internode16.005228.311424.71760
CAR5Developing grain, bracts removed (5 DPA)26.918420.642324.02910
CAR15Developing grain, bracts removed (15 DPA)9.9297310.082211.16150



CDS Structure of MLOC_54215






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362832
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362832CUST_20613_PI427708080NoneNoneNone
MLOC_19189.1NoneAvailableNonecontig_1583848 (Not mapped)
MLOC_27626.1NoneAvailableNonecontig_184867 (Mapped)
MLOC_42220.1NoneAvailableNonecontig_2631864 (Not mapped)
MLOC_45612.1NoneAvailableNonecontig_27942 (Not mapped)
MLOC_45769.1NoneAvailableNonecontig_281012 (Mapped)
MLOC_47534.1NoneAvailableNonecontig_307661 (Mapped)
MLOC_48461.1NoneAvailableNonecontig_324121 (Not mapped)
MLOC_54215.1NoneAvailableNonecontig_389711 (Not mapped)
MLOC_60837.1NoneAvailableNonecontig_44829 (Mapped)
MLOC_6456.1NoneAvailableNonecontig_137580 (Mapped)
MLOC_79380.1NoneAvailableAvailablecontig_8475 (Mapped)
MLOC_8701.1NoneAvailableNonecontig_145505 (Mapped)
MLOC_873.1NoneAvailableNonecontig_1071084 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----