- Predicted Gene MLOC_54214
MLOC_54214 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54214_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54214_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.442246 | 0.290255 | 0.165967 | 0.335672 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0972951 | 0 | 0 | 0.0939103 |
INF1 | Young developing inflorescences (5mm) | 0.0254768 | 0.0562279 | 0.0657498 | 0.0575854 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0955062 | 0.0226018 | 0.0307558 | 0.0595881 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.240557 | 0.0323859 | 0.355748 | 0.139541 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0694871 | 0.0132244 | 0.00866163 | 0.0449601 |
CAR5 | Developing grain, bracts removed (5 DPA) | 372.673 | 256.734 | 265.701 | 319.037 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.367301 | 0.717207 | 0.038587 | 1.1114 |
CDS Structure of MLOC_54214
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54214.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g08200.1 |
+2 |
2e-92 |
291 |
179/397 (45%) |
13111.m00863 protein eukaryotic aspartyl protease domain containing protein, expressed |
TAIR PP10 |
AT1G44130.1 |
+2 |
1e-77 |
252 |
145/383 (38%) |
Eukaryotic aspartyl protease family protein | chr1:16787508-16789318 REVERSE LENGTH=405 |