- Predicted Gene MLOC_54205
MLOC_54205 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54205_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54205_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.99322 | 2.17566 | 1.99553 | 2.24846 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.74808 | 1.42128 | 3.00315 | 2.9848 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0254476 | 0 | 0.0149145 | 0.0326356 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.56482 | 1.83097 | 2.89781 | 2.40947 |
NOD | Developing tillers at six leaf stage, 3rd internode | 40.5989 | 47.47 | 9.61981 | 101.663 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.9548 | 4.82665 | 5.3621 | 5.33415 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.15306 | 6.2431 | 4.82726 | 15.3152 |
CDS Structure of MLOC_54205
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54205.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g18730.1 |
-3 |
0.0 |
1224 |
603/750 (80%) |
13111.m01888 protein glycosyl hydrolase family 3 protein, putative, expressed |
TAIR PP10 |
AT1G78060.1 |
-3 |
0.0 |
815 |
409/748 (55%) |
Glycosyl hydrolase family protein | chr1:29349796-29352868 REVERSE LENGTH=767 |