- Predicted Gene MLOC_54194
MLOC_54194 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 13.6078 | 12.7617 | 13.9546 | 13.4826 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.2392 | 7.23507 | 9.40818 | 8.29639 |
| INF1 | Young developing inflorescences (5mm) | 3.11506 | 3.83771 | 4.15365 | 3.30643 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.96864 | 4.13638 | 5.24232 | 4.88702 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 25.1583 | 12.7173 | 12.4819 | 18.0597 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 42.5791 | 43.6269 | 8.25158 | 125.755 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.1246 | 4.77659 | 4.7893 | 4.89741 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.92405 | 1.60875 | 1.85846 | 4.34588 |
CDS Structure of MLOC_54194
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54194.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g44110.1 |
-3 |
0.0 |
636 |
332/403 (82%) |
13104.m04390 protein hydrolase, putative, expressed |
| TAIR PP10 |
AT5G54140.1 |
-3 |
3e-144 |
437 |
230/400 (58%) |
| Symbols: ILL3 | IAA-leucine-resistant (ILR1)-like 3 | chr5:21965833-21967834 FORWARD LENGTH=428 |
