MLOC_54191 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.264710.96511.463312.3909
LEAShoots from the seedlings (10 cm shoot stage)8.996745.933887.1556.27784
INF1Young developing inflorescences (5mm)14.338216.939419.957216.2031
INF2Developing inflorescences (1-1.5 cm)24.734724.115227.967731.6028
ROORoots from the seedlings (10 cm shoot stage)14.244114.76217.614518.4478
NODDeveloping tillers at six leaf stage, 3rd internode9.308910.699914.022735.6173
CAR5Developing grain, bracts removed (5 DPA)12.953115.059913.106315.5418
CAR15Developing grain, bracts removed (15 DPA)4.15423.337123.8627710.1981



CDS Structure of MLOC_54191






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54191.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54191.1CUST_13182_PI427708080AvailableAvailablecontig_38952 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g43080.1 -3 2e-88 280 162/290 (56%) 13101.m04442 protein exonuclease, putative, expressed
TAIR PP10None-----