MLOC_54161 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.787023.309983.346682.93115
LEAShoots from the seedlings (10 cm shoot stage)2.276982.568952.40262.17507
INF1Young developing inflorescences (5mm)5.182643.890453.612883.43876
INF2Developing inflorescences (1-1.5 cm)2.470582.248931.950472.42284
ROORoots from the seedlings (10 cm shoot stage)1.228981.927811.625732.37202
NODDeveloping tillers at six leaf stage, 3rd internode0.9004570.9924141.485873.90601
CAR5Developing grain, bracts removed (5 DPA)1.125721.16590.7872841.01603
CAR15Developing grain, bracts removed (15 DPA)0.1611690.1373590.1356620.329497



CDS Structure of MLOC_54161






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54161.7
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54161.7CUST_13176_PI427708080AvailableAvailablecontig_38931 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g05820.1 -2 0.0 1220 657/821 (80%) 13103.m00633 protein kinesin motor domain containing protein, expressed
TAIR PP10 AT1G12430.1 -2 0.0 694 395/828 (48%) | Symbols: PAK, ARK3 | armadillo repeat kinesin 3 | chr1:4234122-4238552 REVERSE LENGTH=919