- Predicted Gene MLOC_54143
MLOC_54143 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.87903 | 4.33604 | 4.99602 | 4.61113 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.14836 | 3.11984 | 4.18832 | 3.82625 |
| INF1 | Young developing inflorescences (5mm) | 18.7823 | 18.7638 | 18.7144 | 15.5785 |
| INF2 | Developing inflorescences (1-1.5 cm) | 20.3712 | 21.9353 | 22.0664 | 23.3861 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.79702 | 4.39753 | 4.63118 | 5.07384 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.22134 | 1.25456 | 2.56817 | 4.38433 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.69585 | 3.95047 | 2.68128 | 3.42652 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.76266 | 6.16237 | 5.04717 | 13.3968 |
CDS Structure of MLOC_54143
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54143.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g50220.1 |
+3 |
3e-133 |
397 |
202/227 (89%) |
13103.m05460 protein homologous-pairing protein meu13, putative, expressed |
| TAIR PP10 |
AT1G13330.1 |
+3 |
8e-104 |
320 |
153/222 (69%) |
| Symbols: AHP2 | Arabidopsis Hop2 homolog | chr1:4568008-4569410 FORWARD LENGTH=226 |