- Predicted Gene MLOC_54142
MLOC_54142 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.30292 | 2.4067 | 1.74899 | 1.95004 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.21001 | 3.09726 | 2.91409 | 2.29305 |
| INF1 | Young developing inflorescences (5mm) | 2.66872 | 2.27416 | 2.60872 | 2.06154 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.92393 | 4.88257 | 5.0648 | 5.28532 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.94651 | 2.54584 | 1.93413 | 2.74162 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.21006 | 3.10472 | 4.05368 | 10.3908 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.57855 | 2.41391 | 2.56907 | 2.42533 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.35159 | 1.83265 | 1.67418 | 4.59754 |
CDS Structure of MLOC_54142
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54142.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g44330.2 |
+1 |
0.0 |
659 |
330/508 (65%) |
13112.m04687 protein serine/threonine-protein kinase PRP4, putative, expressed |
| TAIR PP10 |
AT3G25840.2 |
+1 |
0.0 |
574 |
290/494 (59%) |
Protein kinase superfamily protein | chr3:9452993-9456322 REVERSE LENGTH=673 |