MLOC_54136 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.840117.97120.178721.6816
LEAShoots from the seedlings (10 cm shoot stage)15.55318.4570410.567610.6107
INF1Young developing inflorescences (5mm)20.601521.630422.884720.4188
INF2Developing inflorescences (1-1.5 cm)25.611228.671727.955232.3401
ROORoots from the seedlings (10 cm shoot stage)15.120217.102216.682222.5572
NODDeveloping tillers at six leaf stage, 3rd internode15.560920.508617.518969.0389
CAR5Developing grain, bracts removed (5 DPA)14.251113.269314.155114.536
CAR15Developing grain, bracts removed (15 DPA)6.25966.454645.552315.3388



CDS Structure of MLOC_54136






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK353875
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353875CUST_19280_PI427708080NoneNoneNone
MLOC_24284.1NoneAvailableNonecontig_1641444 (Mapped)
MLOC_48025.1NoneAvailableNonecontig_316398 (Mapped)
MLOC_54136.2NoneAvailableAvailablecontig_38916 (Mapped)
MLOC_57481.1NoneAvailableNonecontig_41781 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----