MLOC_54134 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1360320.2136520.18470.18607
LEAShoots from the seedlings (10 cm shoot stage)1.693990.5578471.545641.08806
INF1Young developing inflorescences (5mm)0.03977430.04165580.04879360.0346856
INF2Developing inflorescences (1-1.5 cm)000.04719350.0302554
ROORoots from the seedlings (10 cm shoot stage)00.04785510.2682050.103671
NODDeveloping tillers at six leaf stage, 3rd internode0.0337140.005565300.0313732
CAR5Developing grain, bracts removed (5 DPA)79.937189.435488.46976.4888
CAR15Developing grain, bracts removed (15 DPA)6.360055.388198.8500714.1425



CDS Structure of MLOC_54134






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54134.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54134.2CUST_13171_PI427708080AvailableAvailablecontig_38916 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g19420.1 -1 7e-173 494 245/366 (67%) 13108.m02022 protein O-methyltransferase, putative, expressed
TAIR PP10 AT4G35160.1 -1 5e-56 192 129/362 (36%) O-methyltransferase family protein | chr4:16730989-16732808 REVERSE LENGTH=382