MLOC_54126 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.171445.674276.263096.70379
LEAShoots from the seedlings (10 cm shoot stage)0.5145362.363250.8144551.18735
INF1Young developing inflorescences (5mm)0.1059810.1062560.01934160.0842996
INF2Developing inflorescences (1-1.5 cm)0.0165953000.0208024
ROORoots from the seedlings (10 cm shoot stage)2.744252.78782.308563.56161
NODDeveloping tillers at six leaf stage, 3rd internode00.007307990.0183540.0457718
CAR5Developing grain, bracts removed (5 DPA)0.07897190.07508450.03835730.0737246
CAR15Developing grain, bracts removed (15 DPA)0.1708080.06563080.1444340.41674



CDS Structure of MLOC_54126






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54126.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54126.1CUST_13168_PI427708080AvailableAvailablecontig_38907 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g41880.1 -3 0.0 1117 512/592 (86%) 13108.m04500 protein nucleotide pyrophosphatase/phosphodiesterase, putative, expressed
TAIR PP10 AT5G50400.1 -3 0.0 854 394/591 (67%) | Symbols: ATPAP27, PAP27 | purple acid phosphatase 27 | chr5:20523575-20526231 REVERSE LENGTH=611