- Predicted Gene MLOC_54122
MLOC_54122 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.61165 | 11.0769 | 8.80067 | 8.59879 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.1687 | 8.98118 | 9.43478 | 8.64714 |
| INF1 | Young developing inflorescences (5mm) | 15.7759 | 14.5579 | 15.1291 | 11.9885 |
| INF2 | Developing inflorescences (1-1.5 cm) | 15.1853 | 17.1198 | 14.2956 | 16.3626 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.5969 | 4.69197 | 4.75474 | 4.62397 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.90071 | 2.21743 | 3.59505 | 7.88931 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.90958 | 8.05305 | 9.58317 | 8.31665 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.28195 | 2.02611 | 1.49611 | 4.37525 |
CDS Structure of MLOC_54122
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54122.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g07740.1 |
-1 |
0.0 |
648 |
325/367 (89%) |
13102.m00885 protein RNA binding protein, putative, expressed |
| TAIR PP10 |
AT1G54310.2 |
-1 |
0.0 |
530 |
257/399 (64%) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:20273567-20275449 FORWARD LENGTH=454 |
