- Predicted Gene MLOC_54121
MLOC_54121 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 13.7184 | 13.1131 | 12.8469 | 11.3573 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.20403 | 10.8494 | 16.2414 | 8.57249 |
INF1 | Young developing inflorescences (5mm) | 5.85791 | 6.23251 | 5.72089 | 3.96711 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.72749 | 2.7862 | 3.96194 | 2.6535 |
ROO | Roots from the seedlings (10 cm shoot stage) | 19.3364 | 21.4893 | 22.7861 | 21.6645 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.6049 | 11.1778 | 7.52287 | 31.1551 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.35492 | 3.40545 | 3.4737 | 2.61155 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.887893 | 0.657591 | 0.776502 | 1.39944 |
CDS Structure of MLOC_54121
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54121.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g07750.1 |
+2 |
3e-145 |
441 |
228/285 (80%) |
13102.m00886 protein cell cycle control protein, putative, expressed |
TAIR PP10 |
AT1G54320.1 |
+2 |
2e-115 |
362 |
190/286 (66%) |
LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein | chr1:20275732-20277793 REVERSE LENGTH=349 |