- Predicted Gene MLOC_54120
MLOC_54120 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.58106 | 3.53031 | 3.11452 | 3.21367 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.94004 | 1.83306 | 2.68867 | 1.98315 |
INF1 | Young developing inflorescences (5mm) | 4.59674 | 4.81744 | 4.47219 | 3.85441 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.11053 | 4.51302 | 4.54864 | 4.7036 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.04494 | 5.63104 | 4.84097 | 6.34378 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.94211 | 3.64343 | 3.5229 | 9.62142 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.23315 | 3.45369 | 3.64427 | 3.23689 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.761328 | 0.757349 | 0.866999 | 1.82724 |
CDS Structure of MLOC_54120
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54120.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g19300.1 |
-1 |
0.0 |
703 |
375/450 (83%) |
13103.m02310 protein peptide chain release factor protein, putative, expressed |
TAIR PP10 |
AT1G56350.1 |
-1 |
0.0 |
550 |
286/386 (74%) |
Peptide chain release factor 2 | chr1:21094840-21097826 FORWARD LENGTH=482 |