- Predicted Gene MLOC_54117
MLOC_54117 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 28.4274 | 29.3331 | 30.3378 | 28.6993 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 24.3815 | 24.0609 | 27.6106 | 21.5944 |
| INF1 | Young developing inflorescences (5mm) | 61.6173 | 57.4099 | 56.267 | 47.7404 |
| INF2 | Developing inflorescences (1-1.5 cm) | 52.5011 | 52.8954 | 48.6869 | 56.3266 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 22.3092 | 29.4301 | 27.5101 | 33.7347 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.08722 | 10.8031 | 17.4605 | 39.8496 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 26.7414 | 27.4705 | 28.3207 | 26.5657 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 14.1442 | 13.9336 | 10.9746 | 29.9235 |
CDS Structure of MLOC_54117
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54117.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g02730.1 |
-2 |
0.0 |
1031 |
503/652 (77%) |
13104.m00192 protein tRNA-dihydrouridine synthase 3-like, putative, expressed |
| TAIR PP10 |
AT4G38890.1 |
-2 |
0.0 |
777 |
392/659 (59%) |
FMN-linked oxidoreductases superfamily protein | chr4:18135909-18139100 REVERSE LENGTH=691 |