MLOC_54116 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4804880.7395950.8701460.659418
LEAShoots from the seedlings (10 cm shoot stage)1.276410.7994010.7907250.811013
INF1Young developing inflorescences (5mm)2.24632.101433.322141.92928
INF2Developing inflorescences (1-1.5 cm)3.706653.383733.217733.52423
ROORoots from the seedlings (10 cm shoot stage)0.161270.4840720.4396910.498369
NODDeveloping tillers at six leaf stage, 3rd internode0.5032740.9741931.157113.17758
CAR5Developing grain, bracts removed (5 DPA)1.703231.874972.089851.69553
CAR15Developing grain, bracts removed (15 DPA)0.3648930.5401620.3981050.891237



CDS Structure of MLOC_54116






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54116.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54116.6CUST_7584_PI427708083AvailableAvailablecontig_38901 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g52340.1 -3 2e-56 207 116/255 (45%) 13101.m05477 protein NB-ARC domain containing protein, expressed
TAIR PP10None-----