- Predicted Gene MLOC_54110
MLOC_54110 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.80997 | 12.9127 | 13.2283 | 11.4912 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 15.0787 | 22.7113 | 14.4527 | 13.4839 |
| INF1 | Young developing inflorescences (5mm) | 2.79963 | 3.14704 | 3.67964 | 2.56637 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.05846 | 1.91204 | 4.44902 | 2.9513 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 22.7437 | 18.5102 | 30.6648 | 21.9632 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 15.8765 | 17.8659 | 20.6741 | 51.4175 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 19.7512 | 17.3305 | 17.2216 | 16.3076 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.6189 | 9.31281 | 11.2706 | 23.0658 |
CDS Structure of MLOC_54110
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54110.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g70550.1 |
-2 |
0.0 |
832 |
400/490 (82%) |
13101.m07668 protein heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed |
| TAIR PP10 |
AT5G27730.1 |
-2 |
0.0 |
635 |
283/437 (65%) |
Protein of unknown function (DUF1624) | chr5:9820311-9822868 FORWARD LENGTH=472 |